scpImaging - Functions for handling cellenONE-based imaging data for
single-cell experiments
This package includes functions for curating,
manipulating, and visualising cellenONE-based imaging data for
single-cell experiments. It is designed to work with microscopy
images and associated metadata produced on the cellenONE
platform, which is a high-throughput imaging and handling
system for single-cell analysis. It contains functions to
process the initial images for downstream analysis in cellPose
and cellProfiler, as well as for importing and processing the
data output from these pipelines. It also contains a module for
interactive visualisation of cellenONE-based images using the
iSEE package for interactive single-cell experiment
exploration.
